2008–2009
| Course | Title | Units | In Charge | Fall | Winter | Spring |
| COEN 10 | Introduction to Programming | 5 | Mikkilineni | Mikkilineni | | |
| COEN 11 | Advanced Programming | 5 | Figueira | | Figueira | |
| COEN 11 | Advanced Programming | 5 | Figueira | | Figueira | |
| COEN 12 | Abstract Data Types and Data Structures | 5 | Atkinson | | | Atkinson |
| COEN 12 | Abstract Data Types and Data Structures | 5 | Atkinson | | | Atkinson |
| COEN 19 | Discrete Mathematics | 4 | MATH | Staff | Staff | |
| COEN 20 | Introduction to Embedded Systems | 5 | Lewis | Lewis | | Lewis |
| COEN 21 | Introduction to Logic Design | 5 | ELEN | Lewis | | Staff |
| COEN 30 | Media Computation | 5 | Mikkilineni | Mikkilineni | | |
| COEN 44 | Applied Programming in C | 5 | Lewis | | Lewis | |
| COEN 45 | Applied Programming in MATLAB | 5 | Lewis | | Gibson | Gibson |
| COEN 70 | Formal Spec. and Advanced Data Structures | 5 | Davis | | Davis | |
| COEN 120 | Real-Time Systems | 5 | Li | Grover | | |
| COEN 122 | Computer Architecture | 5 | Ling | | | Ling |
| COEN 127 | Advanced Logic Design | 5 | ELEN | | Staff | |
| COEN 129 | Current Topics | 2 | Shang | | | |
| COEN 145 | Parallel Programming | 5 | Li | | | Li |
| COEN 146 | Computer Networks | 5 | Figueira | | Li | |
| COEN 148 | Computer Graphics | 5 | Lewis | Kao | | |
| COEN 150 | Information Assurance | 4 | Holliday | Holliday | | |
| COEN 152 | Computer Forensics | 5 | Schwarz | | Schwarz | |
| COEN 161 | Web Programming | 5 | Mikkilineni | | Mikkilineni | |
| COEN 162 | Web Infrastructure | 4 | Figueira | | | Figueira |
| COEN 163 | Web Usability | 5 | Mikkilineni | | | |
| COEN 165 | Modeling and Control of Rigid Body Dynamics | 4 | ARTS | | Marquez | |
| COEN 166 | Artificial Intelligence | 4 | Schwarz | | | Schwarz |
| COEN 171 | Programming Languages | 4 | Holliday | | | |
| COEN 172 | Structure and Inter. of Computer Programs | 5 | Davis | | | |
| COEN 173 | Logic Programming | 5 | Davis | | | |
| COEN 174 | Software Engineering | 5 | Atkinson | Atkinson | | |
| COEN 175 | Compilers | 5 | Atkinson | | Atkinson | |
| COEN 177 | Operating Systems | 5 | Li | Li | | |
| COEN 178 | Database Systems | 5 | Holliday | | | Mikkilineni |
| COEN 179 | Theory of Algorithms | 4 | CSCI | | Diaz | Staff |
| COEN 180 | Introduction to Information Storage | 4 | Schwarz | | | |
Sections of COEN 188, 189, 197, and 199 are offered as needed. Sections of COEN 194, 195, and 196 are offered fall, winter, and spring, respectively, under the supervision of a senior design project advisor.